TAP IWS1 in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

Med26

(Domain names are clickable)



List of proteins (9)

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namename additionClick button to show/hide sequence: Download sequence?
c0_seq1_2[173 - 1258] len=1676 path=[4:0-1394 3342:1395-1395 1399:1396-1675]
c0_seq2_18_rccomp2396_c0_seq2_18 [5000 - 195] (REVERSE SENSE) len=5001 path=[4979:0-3639 8619:3640-5000]
c1_seq11_13_rccomp9295_c1_seq11_13 [2833 - 929] (REVERSE SENSE) len=3261 path=[5479:0-526 15617:527-694 6006:695-785 12458:786-1029 6097:1030-2033 7101:2034-2086 7154:2087-2238 7306:2239-2810 16218:2811-2811 7878:2812-3074 8141:3075-3098 11614:3099-3260]
c1_seq13_14_rccomp9295_c1_seq13_14 [1872 - 385] (REVERSE SENSE) len=3192 path=[5479:0-526 6006:527-617 6097:618-1621 7101:1622-1674 7154:1675-1826 13358:1827-2169 7306:2170-2741 16218:2742-2742 7878:2743-3005 8141:3006-3029 11614:3030-3191]
c1_seq16_14_rccomp9295_c1_seq16_14 [2421 - 385] (REVERSE SENSE) len=2849 path=[5479:0-526 6006:527-617 6097:618-1621 7101:1622-1674 7154:1675-1826 7306:1827-2398 16218:2399-2399 7878:2400-2662 8141:2663-2686 11614:2687-2848]
c1_seq3_13_rccomp9295_c1_seq3_13 [2284 - 929] (REVERSE SENSE) len=3604 path=[5479:0-526 15617:527-694 6006:695-785 12458:786-1029 6097:1030-2033 7101:2034-2086 7154:2087-2238 13358:2239-2581 7306:2582-3153 16218:3154-3154 7878:3155-3417 8141:3418-3441 11614:3442-3603]
c0_seq10_3[611 - 1513] len=3794 path=[8062:0-22 191:23-664 9046:665-665 833:666-963 1131:964-992 1160:993-1026 1194:1027-1262 1430:1263-3793]
c0_seq11_1[126 - 641] len=2922 path=[9567:0-21 8530:22-154 1194:155-390 1430:391-2921]
c0_seq9_4[755 - 1657] len=3938 path=[25:0-35 61:36-92 118:93-149 174:150-166 191:167-808 9046:809-809 833:810-1107 1131:1108-1136 1160:1137-1170 1194:1171-1406 1430:1407-3937]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum